Questions Concerning Fluorescence
For light to be active in leaf photosynthesis it must be absorbed. Light energy that is absorbed can be dissipated in one of three ways -- A) lost as heat, B) re-irradiated as red light (fluorescence) or C) used in photosynthesis (photochemistry). These three processes are competitive. That is, an increase in the efficiency of one process will decrease the yield of the other two. Even though chlorophyll fluorescence is only about 1 to 2% of the total light energy absorbed; we can use the fluorescence signal of a leaf to estimate rates of photosynthesis (photochemistry) and heat dissipation. We will see that:
ETR = Fv'/Fm' x PAR x 0.5 x 0.84
NPQ = Fm - Fm'/Fm'
Questions
a) Chlorophyll, xanthophyll, carotenoids? Is it the entire "light harvesting complex" (LHC) or primarily P680 and P700?
b) Why are P680 and P700 the primary chlorophyll molecules that fluorescent in intact leaves? Why is this not the case in a leaf extract, alcohol solution?
c) Why is most of the fluorescence measured with a fluorometer coming from PSII and not PSI (hint, recall that variable fluorescence is measured over a very short time span, usually in ms)?